Maintenance log¶
Each maintenance run of the stores adds one entry here, newest first. A monthly run refreshes the GEO/SRA store and checks both stores. A yearly run adds the heavy checks and removes withdrawn SRA records. The steps are in Run the full download and Run the paper store.
Each check ends as pass, fail or skipped. A failed check links the issue filed for it.
2026-11-07, monthly¶
The first refresh of the full store, a month after the full download.
- Build:
20261107T163933Z - Wall time: 65 min, against a budget of 2 h. That day's snapshots were already on disk, so this run cost less than a normal month. A normal month should take about 1 h 55 min.
| Check | Outcome |
|---|---|
| Refresh | Pass. The store switched to the new build. No HTTP 429 or 503 replies. |
| A changed and a withdrawn Series, through the API | Pass. GSE183765 shows its new Samples; GSE155703 is gone. |
| Coverage | Pass. 200,132 target Series: 200,131 held, 1 gap (soft-missing). |
| Quick checks, network blocked | Pass. All 13. |
| Every record, network blocked | Pass. All 31,127,761 records open and their hashes match. 2 h 52 min. |
Refresh logs kept in support/ |
Pass. |
Store copy to GCS, rclone check |
Pass after a fresh login: 0 differences in 148 files. |
| Rebuild with no network | Skipped by the maintainer's choice: the refresh's own build used no network. |
| Second refresh | Skipped by the maintainer's choice: its change list was the same 388 Series. |
readme 4 query |
Pass. 0.98 s against 2 s. |
| Three other benchmark queries | Fail on a busy node: re-run on a quiet node. |
| Paper store | Skipped: not in service yet. |
Issues filed: